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Classes
Protein mass spectrometry 2005
(BMG 744)
Course will be held on Tuesdays and Fridays 9 - 11 am in the McCallum Building, 4th floor conference room (401)
| Date | Lecturer | Topic |
|---|---|---|
| Jan 4 | S Barnes/H Kim | The world of proteins - beyond genomics [PDF File] |
| Jan 7 | H. Kim | The proteome, proteomics and where to start |
| Jan 11 | C.
Fenselau (U. Maryland) |
12 Noon seminar - Volker Hall room C - required attendance |
| Jan 14 | M Niemann | Techniques of protein separation [PDF File] |
| Jan 18 | H Kim | Protein separation by electrophoresis and other 2D-methods [PDF File] |
| Jan 21 |
|
Student presentations |
| Jan 25 | S Barnes | Mass spectrometry of proteins and peptides: principles and principal methods ( PDF File ) |
| Jan 28 | S Barnes | MALDI of proteins and peptide mass fingerprinting; LC analysis and peptide sequencing (PDF File ) |
| Feb 1 |
|
Class demo of methods |
| Feb 4 |
|
Mid-term exam |
| Feb 8 | A Loraine | Connecting proteomics into bioinformatics ( PDF File ) |
| Feb 11 | G Page | Statistical issues in proteomics and mass spectrometry ( PDF File ) |
| Feb 15 | S Barnes | Qualitative and quantitative burrowing of the proteome |
| Feb 18 |
|
Student presentations |
| Feb 22 | T Townes | Analysis of protein-protein interactions by affinity purification |
| Feb 25 | P Prevelige | Liquid phase protein structure and protein-protein surface mapping |
| Mar 1 | S Barnes | Enzymology, proteomics and mass spectrometry ( PDF File, Paper I Paper II ) |
| Mar 4 | Student presentations | |
| Mar 8 | S Barnes/S Wang | Tissue and fluid proteomics ( PDF File ) |
| Mar 11 | H Kim | Application of proteomics to the brain proteome |
| Mar 15 | S Bailey | The mitochondrial proteome ( PDF File ) |
| Mar 18 |
|
Final exam |