Protein mass spectrometry 2007
(BMG/PHR 744)
Course will be held on Tuesdays and Fridays 9 - 11 am in the McCallum Building, 4th floor conference room (401)
Schedule
| Date | Lecturer | Topic |
|---|---|---|
| Jan 5, Fri | S Barnes/H Kim | The world of biomolecules. The proteome, proteomics and other -omics and where to start [PDF File] |
| Jan 9, Tu | M. Renfrow | Mass spectrometry - gas phase transfer and instrumentation [PDF File] |
| Jan 12, Fri | S Barnes | Methods for the identification of proteins: MALDI-TOF of proteins and peptide mass fingerprinting; LC analysis and peptide sequencing [PDF File] |
| Jan 16, Tu | S Barnes/ Prasain | Importance of fragmentation in mass spectrometry; application to proteomics and other -omics [PDF File] |
| Jan 19, Fri | Facility Staff | Methods demo - MSMS Interpretation [PDF File] |
| Jan 23, Tu | Student presentations Mid-term exam - take-home |
|
| Jan 26, Fri | R. Orlando (UGA) | Connecting proteomics into bioinformatics; MUDPIT and SEQUEST; false discovery rates in complex systems [PDF File] |
| Jan 30, Tu | S Barnes | Simplifying the proteome - techniques of protein purification [PDF File] |
| Feb 2, Fri | H Kim | Protein separation by electrophoresis and other 2D-methods [PDF File] |
| Feb 6, Tu | S. Meleth | Experimental design issues in proteomics [PDF File] |
| Feb 9, Fri | S Barnes/ Prasain | Mass spectrometry in qualitative and quantitative burrowing of the proteome and small molecules in biological samples [PDF File 1] [PDF File 2] |
| Feb 13, Tu | Student presentations |
|
| Feb 16, Fri | P. Prevelige | Mass Spectrometry as a Tool for Studying Protein Structure [PDF File] |
| Feb 20, Tu | S Barnes | Enzymology and mass spectrometry [PDF File] |
| Feb 23, Fri | M. Renfrow | Analysis of protein-protein interactions by affinity purification and mass spectrometry |
| Feb 27, Tu | C-C. Wang J. Mobley |
Tissue and body fluid proteomics; tissue imaging by mass spectrometry [PDF File] |
| Mar 2, Fri | M. Renfrow | Class demo - FT-ICR-MS methodology |
| Mar 6, Tu | Student presentations | |
| Mar 9, Fri | J. Novak M. Renfrow |
Mass spectrometry in glycomics research - Application to IgA nephropathy [PDF File 1] [PDF File 2] |
| Mar 13, Tu | T. Garrett (U. Fl) | Imaging phospholipids and small molecules with MALDI ion trap mass spectrometry |
| Mar 16, Fri | H Kim | Use of proteomics and MS methods in the study of the brain proteome and neurodegenerative diseases |
| Mar 20, Tu | Final exam due |