Momeni SS, Patrick P, Wiener HW, Cutter GR, Ruby JD, Cheon K, Whiddon J, Moser SA, Childers NK. 2014. Mutans streptococci enumeration and genotype selection using different bacitracin-containing media. J Microbiol Methods. 103:53-7. PMID: 24878141 PMCID: PMC4121667

Childers NK, Osgood RC, Hsu KL, Manmontri C, Momeni SS, Mahtani HK, Cutter GR, Ruby JD. 2011. Real-time quantitative polymerase chain reaction for enumeration of Streptococcus mutans from oral samples. Eur J Oral Sci. 119(6):447-54. PMID: 22112030 PMCID: PMC3517291

Ruby JD, Cox CF, Akimoto N, Meada N, Momoi Y. 2010. The Caries Phenomenon: A Timeline from Witchcraft and Superstition to Opinions of the 1500s to Today's Science. Int J Dent. pii: 432767. PMID: 20706536

Moser SA, Mitchell SC, Ruby JD, Momeni S, Osgood RC, Whiddon J, Childers NK. 2010. Repetitive extragenic palindromic PCR for study of Streptococcus mutans diversity and transmission in human populations. J Clin Microbiol. 48(2):599-602. PMID: 20007400

Mitchell SC, Ruby JD, Moser S, Momeni S, Smith A, Osgood R, Litaker M, Childers N. 2009. Maternal transmission of mutans Streptococci in severe-early childhood caries. Pediatr Dent. 31(3):193-201. PMID: 19552223

Ruby JD, Lux R, Shi W, Charon NW, Dasanayake A 2008. Effect of glucose on Treponema denticola cell behavior. Oral Microbiol Immunol. 23(3):234-8. PMID: 18402610

Weston CH, Barfield RD, Ruby JD, Litaker MS, McNeal SF, Eleazer PD. 2008. Comparison of preparation design and material thickness on microbial leakage through Cavit using a tooth model system. Oral Surg Oral Med Oral Pathol Oral Radiol Endod. 105(4):530-5. PMID: 18329588

Ruby J, Goldner M. 2007. Nature of symbiosis in oral disease. J Dent Res. 86(1):8-11. PMID: 17189457

Ruby J, Rehani K, Martin M. 2007. Treponema denticola activates mitogen-activated protein kinase signal pathways through Toll-like receptor 2. Infect Immun. 75(12):5763-8. PMID: 17923521

Dasanayake AP, Li Y, Wiener H, Ruby JD, Lee MJ. 2005. Salivary Actinomyces naeslundii genospecies 2 and Lactobacillus casei levels predict pregnancy outcomes. J Periodontol. 76(2):171-7. PMID: 15974839

Ruby JD, Li Y, Luo Y, Caufield PW. 2003. Genetic diversity of Actinomyces naeslundii genospecies 2 in mother-child pairs. Arch Oral Biol. 48(12):851-5. PMID: 14596875

Ruby JD, Li H, Kuramitsu H, Norris SJ, Goldstein SF, Buttle KF, Charon NW. 1997. Relationship of Treponema denticola periplasmic flagella to irregular cell morphology. J Bacteriol. 179(5):1628-35. PMID: 9045823